from sklearn.decomposition.incremental_pca import IncrementalPCA as SKLModel
import lale.helpers
import lale.operators
from numpy import nan, inf
[docs]class IncrementalPCAImpl():
def __init__(self, n_components=None, whiten=False, copy=True, batch_size=None):
self._hyperparams = {
'n_components': n_components,
'whiten': whiten,
'copy': copy,
'batch_size': batch_size}
[docs] def fit(self, X, y=None):
self._sklearn_model = SKLModel(**self._hyperparams)
if (y is not None):
self._sklearn_model.fit(X, y)
else:
self._sklearn_model.fit(X)
return self
_hyperparams_schema = {
'$schema': 'http://json-schema.org/draft-04/schema#',
'description': 'inherited docstring for IncrementalPCA Incremental principal components analysis (IPCA).',
'allOf': [{
'type': 'object',
'required': ['n_components', 'whiten', 'copy', 'batch_size'],
'relevantToOptimizer': ['n_components', 'whiten', 'copy', 'batch_size'],
'additionalProperties': False,
'properties': {
'n_components': {
'anyOf': [{
'type': 'integer',
'minimumForOptimizer': 2,
'maximumForOptimizer': 256,
'distribution': 'uniform'}, {
'enum': [None]}],
'default': None,
'description': 'Number of components to keep. If ``n_components `` is ``None``,'},
'whiten': {
'type': 'boolean',
'default': False,
'description': 'When True (False by default) the ``components_`` vectors are divided'},
'copy': {
'type': 'boolean',
'default': True,
'description': 'If False, X will be overwritten. ``copy=False`` can be used to'},
'batch_size': {
'anyOf': [{
'type': 'integer',
'minimumForOptimizer': 3,
'maximumForOptimizer': 128,
'distribution': 'uniform'}, {
'enum': [None]}],
'default': None,
'description': 'The number of samples to use for each batch. Only used when calling'},
}}, {
'XXX TODO XXX': 'Parameter: batch_size > only used when calling fit'}],
}
_input_fit_schema = {
'$schema': 'http://json-schema.org/draft-04/schema#',
'description': 'Fit the model with X, using minibatches of size batch_size.',
'type': 'object',
'properties': {
'X': {
'type': 'array',
'items': {
'type': 'array',
'items': {
'type': 'number'},
},
'description': 'Training data, where n_samples is the number of samples and'},
'y': {
}},
}
_input_transform_schema = {
'$schema': 'http://json-schema.org/draft-04/schema#',
'description': 'Apply dimensionality reduction to X.',
'type': 'object',
'properties': {
'X': {
'type': 'array',
'items': {
'type': 'array',
'items': {
'type': 'number'},
},
'description': 'New data, where n_samples is the number of samples'},
},
}
_output_transform_schema = {
'$schema': 'http://json-schema.org/draft-04/schema#',
'description': 'Apply dimensionality reduction to X.',
'type': 'array',
'items': {
'type': 'array',
'items': {
'type': 'number'},
},
}
_combined_schemas = {
'$schema': 'http://json-schema.org/draft-04/schema#',
'description': 'Combined schema for expected data and hyperparameters.',
'type': 'object',
'tags': {
'pre': [],
'op': ['transformer'],
'post': []},
'properties': {
'hyperparams': _hyperparams_schema,
'input_fit': _input_fit_schema,
'input_transform': _input_transform_schema,
'output_transform': _output_transform_schema},
}
if (__name__ == '__main__'):
lale.helpers.validate_is_schema(_combined_schemas)
IncrementalPCA = lale.operators.make_operator(IncrementalPCAImpl, _combined_schemas)