Source code for lale.lib.autogen.pca

from sklearn.decomposition.pca import PCA as SKLModel
import lale.helpers
import lale.operators
from numpy import nan, inf

class PCAImpl():

    def __init__(self, n_components=None, copy=True, whiten=False, svd_solver='auto', tol=0.0, iterated_power='auto', random_state=None):
        self._hyperparams = {
            'n_components': n_components,
            'copy': copy,
            'whiten': whiten,
            'svd_solver': svd_solver,
            'tol': tol,
            'iterated_power': iterated_power,
            'random_state': random_state}

    def fit(self, X, y=None):
        self._sklearn_model = SKLModel(**self._hyperparams)
        if (y is not None):
            self._sklearn_model.fit(X, y)
        else:
            self._sklearn_model.fit(X)
        return self

    def transform(self, X):
        return self._sklearn_model.transform(X)
_hyperparams_schema = {
    '$schema': 'http://json-schema.org/draft-04/schema#',
    'description': 'inherited docstring for PCA    Principal component analysis (PCA)',
    'allOf': [{
        'type': 'object',
        'required': ['n_components', 'copy', 'whiten', 'svd_solver', 'tol', 'iterated_power', 'random_state'],
        'relevantToOptimizer': ['n_components', 'copy', 'whiten', 'svd_solver', 'tol', 'iterated_power'],
        'additionalProperties': False,
        'properties': {
            'n_components': {
                'anyOf': [{
                    'type': 'integer',
                    'forOptimizer': False}, {
                    'type': 'number',
                    'minimumForOptimizer': 0.0,
                    'maximumForOptimizer': 1.0,
                    'distribution': 'uniform'}, {
                    'type': 'string',
                    'forOptimizer': False}, {
                    'enum': [None]}],
                'default': None,
                'description': 'Number of components to keep.'},
            'copy': {
                'type': 'boolean',
                'default': True,
                'description': 'If False, data passed to fit are overwritten and running'},
            'whiten': {
                'type': 'boolean',
                'default': False,
                'description': 'When True (False by default) the `components_` vectors are multiplied'},
            'svd_solver': {
                'enum': ['arpack', 'auto', 'full', 'randomized'],
                'default': 'auto',
                'description': 'auto :'},
            'tol': {
                'XXX TODO XXX': 'float >= 0, optional (default .0)',
                'description': "Tolerance for singular values computed by svd_solver == 'arpack'.",
                'type': 'number',
                'minimumForOptimizer': 1e-08,
                'maximumForOptimizer': 0.01,
                'distribution': 'loguniform',
                'default': 0.0},
            'iterated_power': {
                'XXX TODO XXX': "int >= 0, or 'auto', (default 'auto')",
                'description': 'Number of iterations for the power method computed by',
                'anyOf': [{
                    'type': 'integer',
                    'minimumForOptimizer': 3,
                    'maximumForOptimizer': 4,
                    'distribution': 'uniform'}, {
                    'enum': ['auto']}],
                'default': 'auto'},
            'random_state': {
                'anyOf': [{
                    'type': 'integer'}, {
                    'type': 'object'}, {
                    'enum': [None]}],
                'default': None,
                'description': 'If int, random_state is the seed used by the random number generator;'},
        }}],
}
_input_fit_schema = {
    '$schema': 'http://json-schema.org/draft-04/schema#',
    'description': 'Fit the model with X.',
    'type': 'object',
    'properties': {
        'X': {
            'type': 'array',
            'items': {
                'type': 'array',
                'items': {
                    'type': 'number'},
            },
            'description': 'Training data, where n_samples is the number of samples'},
        'y': {
            
        }},
}
_input_transform_schema = {
    '$schema': 'http://json-schema.org/draft-04/schema#',
    'description': 'Apply dimensionality reduction to X.',
    'type': 'object',
    'properties': {
        'X': {
            'type': 'array',
            'items': {
                'type': 'array',
                'items': {
                    'type': 'number'},
            },
            'description': 'New data, where n_samples is the number of samples'},
    },
}
_output_transform_schema = {
    '$schema': 'http://json-schema.org/draft-04/schema#',
    'description': 'Apply dimensionality reduction to X.',
    'type': 'array',
    'items': {
        'type': 'array',
        'items': {
            'type': 'number'},
    },
}
_combined_schemas = {
    '$schema': 'http://json-schema.org/draft-04/schema#',
    'description': 'Combined schema for expected data and hyperparameters.',
    'type': 'object',
    'tags': {
        'pre': [],
        'op': ['transformer'],
        'post': []},
    'properties': {
        'hyperparams': _hyperparams_schema,
        'input_fit': _input_fit_schema,
        'input_transform': _input_transform_schema,
        'output_transform': _output_transform_schema},
}
if (__name__ == '__main__'):
    lale.helpers.validate_is_schema(_combined_schemas)
PCA = lale.operators.make_operator(PCAImpl, _combined_schemas)